Ian Simpson
Professor
Leads the Biomedical Informatics Group, applying machine learning and data integration to genomics and clinical genotype-to-phenotype data.
Ian Simpson's lab at Edinburgh works on medical imaging & healthcare AI, genomics & computational biology and medical image analysis. 13 papers since 2023, mostly Bioinformatics. 10 PhD students. 13 alumni.
At a glance
- papers, 2023–2026
- 3/ year
- at T1 venues
- 0%
- PhD students
- 10
- MS students
- 0
- alumni listed
- 13
Papers by yearfrom the lab homepage, 2023–2026
- 2 papers2026 · T1 0 · collecting
- 5 papers2025 · T1 0
- 2 papers2024 · T1 0
- 4 papers2023 · T1 0
T1 venuesOtherVenues: Bioinformatics
Research focuspaper titles that use each topic's words
- Medical image analysis1 paper
- Medical imaging & healthcare AI0 papers
- Genomics & computational biology0 papers
- informatics0 papers
- biomedical informatics0 papers
Paper list
From the lab homepage.
20262 papers
- Journal of Molecular Biology, ,169768Gene2Phenotype: a database of structured human monogenic diseases and pathomechanisms
- From Multi-Omics to Gene-Disease Discovery: Knowledge Graphs and LLM-Augmented Analysis Zenodo European Conference on Computational Biology (ECCB), Geneva, SwitzerlandRyan, B., Lee, C., Kamp, S., Issa, H., Rodriguez-Cubillos, M. J., Castagnari, E., Agasi, E., Tirkova, S., Fabrega, N., EL HAJJAJI, C., Ait Oumelloul, M., Emilova Doneva, S., & Simpson, I. (2026, September 29)
20255 papers
- PLOS Computational Biology 21(3): e1012857An integrative network approach for longitudinal stratification in Parkinson’s disease
- Database VolAutomatic genetic phenotype normalization from dysmorphology physical examinations: an overview of the BioCreative VIII—Task 3 competition
- —CLEF Working Notes (2025) pp.383-392 (opens in a new tab)
- —CLEF Working Notes (2025) pp.393-410 (opens in a new tab)
- Breast Cancer ResThe significance of molecular heterogeneity in breast cancer batch correction and dataset integration
20242 papers
- CUE@MultiCardioNER submission at CLEFComparative Analyses of Multilingual Drug Entity Recognition Systems for Clinical Case Reports In Cardiology
- BioinformaticsMulti-Omic Graph Diagnosis (MOGDx) : A data integration tool to perform classification tasks for heterogeneous diseases
20234 papers
- Journal of Experimental Botany, ;, erad290A phospho-dawn of protein modification anticipates light onset in the picoeukaryote O. tauri
- Bioinformatics AdvancesBioNAR: an integrated biological network analysis package in bioconductor (opens in a new tab)
- PLoS ONE 18(12): e0295848Improved prediction of hiking speeds using a data driven approach
- KU AIGEN ICL EDI@BC8 Track 3: Proceedings of the Biocreative VIII Challenge and Workshop : Curation and Evaluation in the Era of Generative ModelsKim H, Kim C, Sohn J, Beck T, Rei M, Kim S, Simpson, TI, Posma JM, Lain A, Sung M, Kang J. Advancing Phenotype Named Entity Recognition and Normalization for Dysmorphology Physical Examination Reports
Where alumni went13 listed, 0% to industry
Industry 0Academia 1
Also to
- University of Edinburgh
Apply to EdinburghFall 2027
Not announced yet
Informatics PhD
- Round
- Rolling (funding consideration)
- Opens
- —
- GRE
- See program page
- English
- See program page
- Fee
- none
Not yet confirmed for this intake.
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- The lab homepage
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